Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCCAGCAGAGCTTAGCTTCAAGGACACCTGCC
..((((((((((((((.((((&)))))))))).))))...................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282714
GeneSymbolFAM107A
Binding site1578,1617
Score0.846
Seed1
Au0.412
Energy-20.2
Binding len39
Me-4.957
Phylopstem-0.2859252511764706
Phylopflank-0.45025990974999996
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end7
Position3UTR
2D Structure