Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCCCGGAGGTTTGCCTTGAGTTTTGGACCCCAGCAGCTGCAGA
((((((((((((((.((((((&.)))))).......))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282716
GeneSymbolSTAG3
Binding site3121,3169
Score0.923
Seed1
Au0.441
Energy-23.9
Binding len32
Me-4.673
Phylopstem3.4443300000000003
Phylopflank2.6208434225
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure