Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACCTCCACAGCTGTGAA
(((((((((.((..((.(((.&))).))..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282717
GeneSymbolSTAG3
Binding site3472,3493
Score1.0
Seed1
Au0.338
Energy-21.3
Binding len21
Me-7.326
Phylopstem1.9904474444444442
Phylopflank0.8018216600000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure