Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGGTGCCGTAGCTCAC
.((.(((((((((.....(((&)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282722
GeneSymbolLDAH
Binding site3109,3128
Score0.846
Seed0
Au0.5
Energy-17.4
Binding len19
Me-8.651
Phylopstem1.2714008666666665
Phylopflank2.5285691852500003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure