Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTTCCGCAACCGCTTCTTGCTGCTGCTGGCCCTGGCTGCGC
.((((((((((((((((((((&)))))...))))))))....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282728
GeneSymbolPXYLP1
Binding site142,186
Score0.846
Seed1
Au0.338
Energy-22.6
Binding len44
Me-3.793
Phylopstem3.9523061162790696
Phylopflank2.3847082302500002
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end8
Position5UTR
2D Structure