Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCAGCTGAGCCTGCAAG
((((((((.(((((((.(((.&)))..)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282735
GeneSymbolSPATS2L
Binding site3900,3922
Score0.923
Seed1
Au0.426
Energy-21.7
Binding len22
Me-4.994
Phylopstem0.2095065188888889
Phylopflank0.560209001
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure