Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCCAAACCAGCTGA
...((((((.((((((((((.&))))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282755
GeneSymbolMTA3
Binding site3554,3575
Score0.923
Seed0
Au0.456
Energy-24.1
Binding len21
Me-7.757
Phylopstem-0.18419218
Phylopflank0.012661692500000002
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure