Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTCCGGCTGCGGCAGGCAGC
((((.((((((((((...(((&)))...))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282755
GeneSymbolMTA3
Binding site2413,2436
Score0.923
Seed0
Au0.485
Energy-22.1
Binding len23
Me-8.29
Phylopstem0.30658434999999995
Phylopflank0.18420096125
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure