Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCAGTCCGTTGCTGA
...((((.(((((((((((.(&).))))))).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363999
GeneSymbolCANX
Binding site2889,2909
Score0.923
Seed0
Au0.603
Energy-20.7
Binding len20
Me-8.828
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure