Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGTGGGAGTGGAGTGGAGCGGCTGTGGTTGCC
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282759
GeneSymbolTRA2A
Binding site18,54
Score0.846
Seed1
Au0.353
Energy-20.5
Binding len16
Me-4.957
Phylopstem1.573727807142857
Phylopflank1.4629397056944444
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure