Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCAGCTCCAGCAGATGCGGCAGCTCCAGCTGCAGA
(((((((((.((((((.....&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282768
GeneSymbolKIAA1217
Binding site1921,1959
Score0.974
Seed1
Au0.397
Energy-23.3
Binding len18
Me-5.18
Phylopstem3.845568666666667
Phylopflank2.109715725
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure