Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCCAGCTCCAGCAGATGCGGCAGCTCCAGCTGCAGA
(((((((((.((((((.....&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282769
GeneSymbolKIAA1217
Binding site1370,1408
Score0.923
Seed1
Au0.397
Energy-23.3
Binding len18
Me-5.18
Phylopstem4.160864333333333
Phylopflank4.0195622408475
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure