Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCGCAGAAGTC
..((..((((((((((..(((&)))))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282769
GeneSymbolKIAA1217
Binding site1926,1944
Score0.923
Seed0
Au0.426
Energy-20.7
Binding len18
Me-10.977
Phylopstem0.7931193000000001
Phylopflank1.380748615
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure