Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAACTGAACTGCCTTTCTTGGAGCTGCAC
.(((((((.(((....(((((&.)))))..))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364
GeneSymbolDLG2
Binding site4338,4369
Score0.808
Seed1
Au0.603
Energy-19.1
Binding len20
Me-7.964
Phylopstem2.828214285714286
Phylopflank2.294686525
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure