Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTTCACTCCATTCCCTTGAGATACATCCAGGTAGTTGCAT
.(((((((((((.(((((((.&.))).....)))).))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282774
GeneSymbolPOLR1B
Binding site5600,5644
Score0.846
Seed1
Au0.647
Energy-19.2
Binding len28
Me-5.082
Phylopstem0.47011924615384615
Phylopflank0.09913227624999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure