Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGATGGGCCTGGGCTGCAAA
((((((((..((((...(((.&)))......))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282787
GeneSymbolNFIB
Binding site3275,3299
Score0.846
Seed1
Au0.456
Energy-20.2
Binding len24
Me-7.205
Phylopstem0.774253125
Phylopflank0.9298506449999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure