Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGTCAACACCACTTTGCAGCATTCAGCTGCT
..(((((((..((((((((((&.))))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282788
GeneSymbolGARIN1B
Binding site1113,1148
Score1.0
Seed1
Au0.471
Energy-24.5
Binding len22
Me-9.024
Phylopstem0.06679567719999996
Phylopflank0.62226634555
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure