Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTACCCAAGAACTGCAGCAGCC
..((.(((((((((.(..(((&.)))..).))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282788
GeneSymbolGARIN1B
Binding site694,721
Score1.0
Seed0
Au0.471
Energy-20.8
Binding len21
Me-9.811
Phylopstem1.4382033733333333
Phylopflank1.6023600194999998
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure