Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATGGCTGCAGAGTAATTCAGCGCATCCTAGAGCATTGCACTGCAGA
((((((((((((((((((((.&)))))))))))))).............................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282791
GeneSymbolPUM2
Binding site2557,2607
Score0.923
Seed1
Au0.544
Energy-23.9
Binding len50
Me-3.938
Phylopstem5.781583265306123
Phylopflank4.508085375
Longest consecutive pairings14
Position of longest consecutive pairings36
Pairings in 3prime end7
PositionCDS
2D Structure