Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCCCGTGGCTGTGGG
((((((((((((.(((.....&))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364000
GeneSymbolCANX
Binding site1554,1571
Score0.846
Seed1
Au0.471
Energy-19.4
Binding len17
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure