Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAACAACCAGCAGCTAATCACATTTTCTCACAGCAGG
((((((((((((((((.((((&))))..)))))).)))))).................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282798
GeneSymbolR3HDM1
Binding site1990,2031
Score0.846
Seed1
Au0.544
Energy-22.1
Binding len41
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure