Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACACCGTCTTAGCCACATTCCCCTCCATTTCAGCTGCAC
.(((((((((((.(((.((((&))))))))))........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282800
GeneSymbolR3HDM1
Binding site3217,3260
Score0.846
Seed1
Au0.559
Energy-20.6
Binding len43
Me-5.082
Phylopstem4.110865508571429
Phylopflank3.2089789125
Longest consecutive pairings10
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure