Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGAAGGCGACTGACAGCTGA
...(((((((((((((.....&.))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282849
GeneSymbolRGN
Binding site21,43
Score0.846
Seed0
Au0.382
Energy-20.1
Binding len16
Me-6.515
Phylopstem-0.20872329285714292
Phylopflank-0.12167499833333335
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end3
Position5UTR
2D Structure