Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCTGCCAACCGCAGAAGTG
..((..(((((((((((((((&)))))))....))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282849
GeneSymbolRGN
Binding site1239,1263
Score0.923
Seed0
Au0.515
Energy-19.4
Binding len24
Me-10.977
Phylopstem1.1401313052631579
Phylopflank3.7138375300000006
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure