Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCGCCGCCGCTGCT
..(((((.(((((.((..(((&))))).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282853
GeneSymbolCCNY
Binding site372,390
Score0.846
Seed0
Au0.118
Energy-22.5
Binding len18
Me-8.127
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings13
Pairings in 3prime end5
Position5UTR
2D Structure