Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGCCGCGAGGACACGGGCTGCAAC
((((((((((((((...((((&)))).)))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282853
GeneSymbolCCNY
Binding site636,665
Score0.846
Seed1
Au0.353
Energy-22.3
Binding len29
Me-4.906
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure