Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAATGCACCCAGCTGCC
..(((((((.((.((((((((&))))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364008
GeneSymbolNOTCH2NLB
Binding site1160,1181
Score0.846
Seed1
Au0.544
Energy-21.6
Binding len21
Me-7.489
Phylopstem-0.8452615727272726
Phylopflank-0.5654520718749999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure