Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCTGAGCATGCTGGTGGCCACTGAGGTGTGCCGGGTG
(((((((((((...........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282862
GeneSymbolRASGEF1A
Binding site921,961
Score1.0
Seed1
Au0.397
Energy-19.9
Binding len13
Me-10.399
Phylopstem-0.14433661272727272
Phylopflank-0.164829877375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure