Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTATAAAATAAAGGTATTTCTAAGCAAAGCAGTTGCAT
.(((((((((..(((((((((&)))))))))......................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282865
GeneSymbolTMEM108
Binding site857,898
Score0.846
Seed1
Au0.735
Energy-19.3
Binding len41
Me-9.965
Phylopstem1.7298997777777778
Phylopflank3.6956120749999997
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure