Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCAAAGTAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282868
GeneSymbolRHD
Binding site1540,1566
Score0.846
Seed0
Au0.5
Energy-20.1
Binding len26
Me-5.728
Phylopstem0.08320500000000002
Phylopflank0.0267713375
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure