Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCGGCTGTGAT
(((((((((((((........&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282876
GeneSymbolTMEM139
Binding site2199,2213
Score0.923
Seed1
Au0.471
Energy-19.6
Binding len14
Me-5.763
Phylopstem-0.0877222923076923
Phylopflank-0.13844959
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure