Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTAATAGCTGTAAA
(((((((((.((((((.....&))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282883
GeneSymbolMAP3K19
Binding site675,693
Score0.846
Seed1
Au0.588
Energy-17.3
Binding len18
Me-5.18
Phylopstem2.8100271111111113
Phylopflank4.1839175325
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure