Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCAAAGCATCAGCAGAAGTGAGGAGTTCGACCAAGATGGTGACTGCAGT
(((((((((((((((((((((&))))))))....))).))))...........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282883
GeneSymbolMAP3K19
Binding site142,196
Score0.923
Seed1
Au0.544
Energy-15.8
Binding len54
Me-3.938
Phylopstem-0.0740550433962264
Phylopflank0.6908755950000001
Longest consecutive pairings8
Position of longest consecutive pairings46
Pairings in 3prime end8
PositionCDS
2D Structure