Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTTCAACTGCGTGCATGAGCTGGAGC
((.((((((((((((.(((((&)).)))))))))).......))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282899
GeneSymbolRAPGEF4
Binding site2071,2100
Score0.846
Seed0
Au0.574
Energy-17.4
Binding len29
Me-5.728
Phylopstem5.342106942105263
Phylopflank5.075156120000001
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure