Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAATGCACCCAGCTGCC
..(((((((.((.((((((((&))))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364013
GeneSymbolNOTCH2NLC
Binding site1177,1198
Score0.923
Seed1
Au0.544
Energy-21.6
Binding len21
Me-7.489
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure