Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAATCCTGATGCAGCTCAAG
(((.(((((((((((.((((.&))))))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282900
GeneSymbolRAPGEF4
Binding site2562,2586
Score0.846
Seed0
Au0.515
Energy-18.3
Binding len24
Me-7.203
Phylopstem4.032437
Phylopflank4.615347051125
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure