Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGCCCAGAAAAGCAC
.(((..(((.(((((((((((&))))))))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282902
GeneSymbolTRPS1
Binding site1851,1873
Score0.949
Seed0
Au0.529
Energy-20.2
Binding len22
Me-11.056
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure