Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCGGCGAAGTAGG
((((.(((((((((((.....&)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282907
GeneSymbolCCT8
Binding site168,187
Score0.846
Seed0
Au0.309
Energy-21.1
Binding len19
Me-8.057
Phylopstem4.768659636363636
Phylopflank2.995320525874999
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end3
Position5UTR
2D Structure