Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCGGCCACCGGAGCCTGCGGG
((((((((.((((.((..(((&)))..)).)))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282907
GeneSymbolCCT8
Binding site273,296
Score0.846
Seed1
Au0.368
Energy-19.0
Binding len23
Me-5.851
Phylopstem4.168549666666666
Phylopflank4.57558015
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure