Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACTATTTTAAGAGAACTAGAAGTACAGCATCCTGCTGCAAA
(((((((....((((((....&.)))))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282908
GeneSymbolCCT8
Binding site290,334
Score0.923
Seed1
Au0.647
Energy-17.6
Binding len20
Me-11.375
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure