Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCATCCTGCTGCAAA
(((((((....((((((....&)))))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282909
GeneSymbolCCT8
Binding site210,229
Score0.846
Seed1
Au0.588
Energy-17.6
Binding len19
Me-11.375
Phylopstem7.152804285714284
Phylopflank4.757550200000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure