Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGCAACTCAGCCAAGCAT
.(((.((((.(((((((.(((&))).)))))))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282910
GeneSymbolCARF
Binding site5757,5779
Score0.923
Seed0
Au0.676
Energy-19.3
Binding len22
Me-9.155
Phylopstem0.0623823
Phylopflank0.11738040500000003
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure