Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTTTATGCAAGGTA
((((.(((((.((((((((...&)))))))).))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282911
GeneSymbolCARF
Binding site5308,5328
Score0.846
Seed0
Au0.765
Energy-16.2
Binding len20
Me-10.881
Phylopstem0.08326815
Phylopflank0.5835861637499999
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure