Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGCAACTCAGCCAAGCAT
.(((.((((.(((((((.(((&))).)))))))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282911
GeneSymbolCARF
Binding site5838,5860
Score1.0
Seed0
Au0.676
Energy-19.3
Binding len22
Me-9.155
Phylopstem0.29444099999999995
Phylopflank0.27169912
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure