Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCGTCTTAGGAGCTGTGAG
(((((((((((((....((((&)))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282911
GeneSymbolCARF
Binding site731,755
Score0.846
Seed1
Au0.529
Energy-17.5
Binding len24
Me-5.763
Phylopstem2.091853357894737
Phylopflank2.000344792625
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end4
PositionCDS
2D Structure