Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTACAACACAAGCTAGCAT
.(((((((...((((((((((&))).)))))))...)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282917
GeneSymbolRALGAPB
Binding site1531,1554
Score0.846
Seed1
Au0.529
Energy-19.9
Binding len23
Me-8.917
Phylopstem4.593683181818182
Phylopflank5.715445111125
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure