Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTCAAGACCGCAGTGCAGA
(((((.((((((((....(((&)))......))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282919
GeneSymbolSPIDR
Binding site2559,2582
Score0.923
Seed0
Au0.397
Energy-22.5
Binding len23
Me-6.807
Phylopstem0.186903875
Phylopflank1.1368501062499998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure