Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGATCATCCAGTTCTTCATGCTCCAGACGTACGGCCAGCAGCTTCAGA
(((.(((((((((((((..((&.)).))))))).)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282920
GeneSymbolMX1
Binding site1324,1376
Score0.923
Seed0
Au0.426
Energy-20.8
Binding len23
Me-6.97
Phylopstem2.1910497
Phylopflank1.12465814
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure