Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTGCGGCCGTCGGTGCTGCTGCTCCTGCAGCTGCC
..((((((((((..(((.(((&.)))..)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364104
GeneSymbolCDH12
Binding site234,273
Score0.923
Seed1
Au0.412
Energy-23.7
Binding len22
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure