Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCGCGGTCCCTGCC
..((((((((((((.......&))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282940
GeneSymbolMDH1B
Binding site23,39
Score0.846
Seed1
Au0.382
Energy-17.0
Binding len16
Me-5.925
Phylopstem0.011118099999999975
Phylopflank0.5216024352884615
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end1
Position5UTR
2D Structure